J3_7KGB_013
3D structure
- PDB id
- 7KGB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of A2296-methylated Mycobacterium tuberculosis ribosome bound with SEQ-9
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CAUC*GUU*AUUAAAG
- Length
- 14 nucleotides
- Bulged bases
- 7KGB|1|A|A|2756, 7KGB|1|A|U|2757
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7KGB_013 not in the Motif Atlas
- Homologous match to J3_7RQB_012
- Geometric discrepancy: 0.0792
- The information below is about J3_7RQB_012
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_32601.3
- Basepair signature
- cWW-tWH-cHW-tSH-cWW-tSS-F-cSS-cWW
- Number of instances in this motif group
- 4
Unit IDs
7KGB|1|A|C|2755
7KGB|1|A|A|2756
7KGB|1|A|U|2757
7KGB|1|A|C|2758
*
7KGB|1|A|G|2783
7KGB|1|A|U|2784
7KGB|1|A|U|2785
*
7KGB|1|A|A|2799
7KGB|1|A|U|2800
7KGB|1|A|U|2801
7KGB|1|A|A|2802
7KGB|1|A|A|2803
7KGB|1|A|A|2804
7KGB|1|A|G|2805
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain D
- 50S ribosomal protein L3
- Chain K
- 50S ribosomal protein L14
Coloring options: