J3_7KJT_001
3D structure
- PDB id
- 7KJT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- KEOPS tRNA modifying sub-complex of archaeal Cgi121 and tRNA
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.34 Å
Loop
- Sequence
- CGUAGCUCAGUCUGGCAGAGCG*UGGUCG*UCGG
- Length
- 32 nucleotides
- Bulged bases
- 7KJT|1|A|C|16, 7KJT|1|A|U|17, 7KJT|1|A|G|18, 7KJT|1|A|G|19, 7KJT|1|A|C|20, 7KJT|1|A|U|47
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_33327.1
- Basepair signature
- cWW-F-F-F-F-F-cWW-F-F-F-F-tHW-F-F-F-cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 1
Unit IDs
7KJT|1|A|C|5
7KJT|1|A|G|6
7KJT|1|A|U|7
7KJT|1|A|A|8
7KJT|1|A|G|9
7KJT|1|A|C|10
7KJT|1|A|U|11
7KJT|1|A|C|12
7KJT|1|A|A|13
7KJT|1|A|G|14
7KJT|1|A|U|15
7KJT|1|A|C|16
7KJT|1|A|U|17
7KJT|1|A|G|18
7KJT|1|A|G|19
7KJT|1|A|C|20
7KJT|1|A|A|21
7KJT|1|A|G|22
7KJT|1|A|A|23
7KJT|1|A|G|24
7KJT|1|A|C|25
7KJT|1|A|G|26
*
7KJT|1|A|U|44
7KJT|1|A|G|45
7KJT|1|A|G|46
7KJT|1|A|U|47
7KJT|1|A|C|48
7KJT|1|A|G|49
*
7KJT|1|A|U|65
7KJT|1|A|C|66
7KJT|1|A|G|67
7KJT|1|A|G|68
Current chains
- Chain A
- RNA (70-MER)
Nearby chains
- Chain H
- Regulatory protein Cgi121
Coloring options: