3D structure

PDB id
7KWG (explore in PDB, NAKB, or RNA 3D Hub)
Description
Staphylococcus aureus 30S ribosomal subunit in presence of spermidine
Experimental method
ELECTRON MICROSCOPY
Resolution
3.75 Å

Loop

Sequence
CCCGCACAAG*CUAGUAA*UGAAUACGUUCCCGGG
Length
33 nucleotides
Bulged bases
7KWG|1|a|C|1389
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7KWG|1|a|C|940
7KWG|1|a|C|941
7KWG|1|a|C|942
7KWG|1|a|G|943
7KWG|1|a|C|944
7KWG|1|a|A|945
7KWG|1|a|C|946
7KWG|1|a|A|947
7KWG|1|a|A|948
7KWG|1|a|G|949
*
7KWG|1|a|C|1355
7KWG|1|a|U|1356
7KWG|1|a|A|1357
7KWG|1|a|G|1358
7KWG|1|a|U|1359
7KWG|1|a|A|1360
7KWG|1|a|A|1361
*
7KWG|1|a|U|1383
7KWG|1|a|G|1384
7KWG|1|a|A|1385
7KWG|1|a|A|1386
7KWG|1|a|U|1387
7KWG|1|a|A|1388
7KWG|1|a|C|1389
7KWG|1|a|G|1390
7KWG|1|a|U|1391
7KWG|1|a|U|1392
7KWG|1|a|C|1393
7KWG|1|a|C|1394
7KWG|1|a|C|1395
7KWG|1|a|G|1396
7KWG|1|a|G|1397
7KWG|1|a|G|1398

Current chains

Chain a
16S ribosomal RNA

Nearby chains

Chain e
30S ribosomal protein S5
Chain g
30S ribosomal protein S7
Chain i
30S ribosomal protein S9

Coloring options:

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