J3_7KWG_018

3D structure

PDB id

7KWG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 30S ribosomal subunit in presence of spermidine

Experimental method

ELECTRON MICROSCOPY

Resolution

3.75 Å

Loop

Sequence

UUGACAAC*GCCUUCCC*GGGACA

Length

22 nucleotides

Bulged bases

7KWG|1|a|C|1015, 7KWG|1|a|U|1035

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7KWG|1|a|U|1011
7KWG|1|a|U|1012
7KWG|1|a|G|1013
7KWG|1|a|A|1014
7KWG|1|a|C|1015
7KWG|1|a|A|1016
7KWG|1|a|A|1017
7KWG|1|a|C|1018
*
7KWG|1|a|G|1031
7KWG|1|a|C|1032
7KWG|1|a|C|1033
7KWG|1|a|U|1034
7KWG|1|a|U|1035
7KWG|1|a|C|1036
7KWG|1|a|C|1037
7KWG|1|a|C|1038
*
7KWG|1|a|G|1045
7KWG|1|a|G|1046
7KWG|1|a|G|1047
7KWG|1|a|A|1048
7KWG|1|a|C|1049
7KWG|1|a|A|1050

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain c

30S ribosomal protein S3

Chain n

30S ribosomal protein S14 type Z