3D structure

PDB id
7KWG (explore in PDB, NAKB, or RNA 3D Hub)
Description
Staphylococcus aureus 30S ribosomal subunit in presence of spermidine
Experimental method
ELECTRON MICROSCOPY
Resolution
3.75 Å

Loop

Sequence
UAAGCUU*AAGUUGACUGC*GAGGAAGGUG
Length
28 nucleotides
Bulged bases
7KWG|1|a|U|1194
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7KWG|1|a|U|1128
7KWG|1|a|A|1129
7KWG|1|a|A|1130
7KWG|1|a|G|1131
7KWG|1|a|C|1132
7KWG|1|a|U|1133
7KWG|1|a|U|1134
*
7KWG|1|a|A|1162
7KWG|1|a|A|1163
7KWG|1|a|G|1164
7KWG|1|a|U|1165
7KWG|1|a|U|1166
7KWG|1|a|G|1167
7KWG|1|a|A|1168
7KWG|1|a|C|1169
7KWG|1|a|U|1170
7KWG|1|a|G|1171
7KWG|1|a|C|1172
*
7KWG|1|a|G|1186
7KWG|1|a|A|1187
7KWG|1|a|G|1188
7KWG|1|a|G|1189
7KWG|1|a|A|1190
7KWG|1|a|A|1191
7KWG|1|a|G|1192
7KWG|1|a|G|1193
7KWG|1|a|U|1194
7KWG|1|a|G|1195

Current chains

Chain a
16S ribosomal RNA

Nearby chains

Chain b
30S ribosomal protein S2
Chain g
30S ribosomal protein S7
Chain i
30S ribosomal protein S9
Chain j
30S ribosomal protein S10
Chain n
30S ribosomal protein S14 type Z

Coloring options:

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