J3_7LS2_007

3D structure

PDB id

7LS2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome from mouse bound to eEF2 (Class I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GAC*GCUAAGGAG*CAC

Length

15 nucleotides

Bulged bases

7LS2|1|A2|A|1800, 7LS2|1|A2|A|1804

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7LS2|1|A2|G|1771
7LS2|1|A2|A|1772
7LS2|1|A2|C|1773
*
7LS2|1|A2|G|1797
7LS2|1|A2|C|1798
7LS2|1|A2|U|1799
7LS2|1|A2|A|1800
7LS2|1|A2|A|1801
7LS2|1|A2|G|1802
7LS2|1|A2|G|1803
7LS2|1|A2|A|1804
7LS2|1|A2|G|1805
*
7LS2|1|A2|C|1818
7LS2|1|A2|A|1819
7LS2|1|A2|C|1820

Current chains

Chain A2

28S rRNA

Nearby chains

Chain j

60S acidic ribosomal protein P0

Chain k

60S ribosomal protein L12