J3_7LS2_020
3D structure
- PDB id
- 7LS2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome from mouse bound to eEF2 (Class I)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- U(OMG)GA*UAAGA*UA
- Length
- 11 nucleotides
- Bulged bases
- 7LS2|1|m2|A|921, 7LS2|1|m2|G|923
- QA status
- Modified nucleotides: OMG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7LS2|1|m2|U|684
7LS2|1|m2|OMG|685
7LS2|1|m2|G|686
7LS2|1|m2|A|687
*
7LS2|1|m2|U|920
7LS2|1|m2|A|921
7LS2|1|m2|A|922
7LS2|1|m2|G|923
7LS2|1|m2|A|924
*
7LS2|1|m2|U|1024
7LS2|1|m2|A|1025
Current chains
- Chain m2
- 18S rRNA
Nearby chains
- Chain E3
- 40S ribosomal protein S23
- Chain N3
- 40S ribosomal protein S13
- Chain P3
- 40S ribosomal protein S15a
- Chain S3
- 40S ribosomal protein S27-like
- Chain t
- 40S ribosomal protein S7
- Chain w2
- 40S ribosomal protein S11
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