J3_7LS2_047
3D structure
- PDB id
- 7LS2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome from mouse bound to eEF2 (Class I)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CACUG*CGUGAUGGGGAUCG*CAUGAACGAG
- Length
- 29 nucleotides
- Bulged bases
- 7LS2|1|m2|U|1537, 7LS2|1|m2|G|1605
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7LS2|1|m2|C|1534
7LS2|1|m2|A|1535
7LS2|1|m2|C|1536
7LS2|1|m2|U|1537
7LS2|1|m2|G|1538
*
7LS2|1|m2|C|1599
7LS2|1|m2|G|1600
7LS2|1|m2|U|1601
7LS2|1|m2|G|1602
7LS2|1|m2|A|1603
7LS2|1|m2|U|1604
7LS2|1|m2|G|1605
7LS2|1|m2|G|1606
7LS2|1|m2|G|1607
7LS2|1|m2|G|1608
7LS2|1|m2|A|1609
7LS2|1|m2|U|1610
7LS2|1|m2|C|1611
7LS2|1|m2|G|1612
*
7LS2|1|m2|C|1631
7LS2|1|m2|A|1632
7LS2|1|m2|U|1633
7LS2|1|m2|G|1634
7LS2|1|m2|A|1635
7LS2|1|m2|A|1636
7LS2|1|m2|C|1637
7LS2|1|m2|G|1638
7LS2|1|m2|A|1639
7LS2|1|m2|G|1640
Current chains
- Chain m2
- 18S rRNA
Nearby chains
- Chain A3
- 40S ribosomal protein S18
- Chain B3
- 40S ribosomal protein S19
- Chain R3
- 40S ribosomal protein S25
- Chain s2
- 40S ribosomal protein S5
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