J3_7M4V_015
3D structure
- PDB id
- 7M4V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- A. baumannii Ribosome-Eravacycline complex: 50S
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.54 Å
Loop
- Sequence
- CUUG*CGAUAGUGAACCAGUAC*GGAAAG
- Length
- 27 nucleotides
- Bulged bases
- 7M4V|1|A|U|41, 7M4V|1|A|U|447, 7M4V|1|A|C|455
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7M4V_015 not in the Motif Atlas
- Homologous match to J3_9DFE_003
- Geometric discrepancy: 0.1163
- The information below is about J3_9DFE_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_07616.2
- Basepair signature
- cWW-cSS-tSS-tSW-tHW-cWW-tWH-F-F-tHH-tSS-tWH-F-tHS-cWW-F-cSH
- Number of instances in this motif group
- 11
Unit IDs
7M4V|1|A|C|39
7M4V|1|A|U|40
7M4V|1|A|U|41
7M4V|1|A|G|42
*
7M4V|1|A|C|444
7M4V|1|A|G|445
7M4V|1|A|A|446
7M4V|1|A|U|447
7M4V|1|A|A|448
7M4V|1|A|G|449
7M4V|1|A|U|450
7M4V|1|A|G|451
7M4V|1|A|A|452
7M4V|1|A|A|453
7M4V|1|A|C|454
7M4V|1|A|C|455
7M4V|1|A|A|456
7M4V|1|A|G|457
7M4V|1|A|U|458
7M4V|1|A|A|459
7M4V|1|A|C|460
*
7M4V|1|A|G|467
7M4V|1|A|G|468
7M4V|1|A|A|469
7M4V|1|A|A|470
7M4V|1|A|A|471
7M4V|1|A|G|472
Current chains
- Chain A
- 23s ribosomal RNA
Nearby chains
- Chain 1
- 50S ribosomal protein L34
- Chain E
- 50S ribosomal protein L4
- Chain P
- 50S ribosomal protein L20
- Chain S
- 50S ribosomal protein L23
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