J3_7M4W_036
3D structure
- PDB id
- 7M4W (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- A. baumannii Ribosome-Eravacycline complex: 70S Empty
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.55 Å
Loop
- Sequence
- UUU*AUACUGC*GAGGAAGGCG
- Length
- 20 nucleotides
- Bulged bases
- 7M4W|1|a|C|1180
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7M4W_036 not in the Motif Atlas
- Homologous match to J3_4LFB_018
- Geometric discrepancy: 0.1388
- The information below is about J3_4LFB_018
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_40706.1
- Basepair signature
- cWW-F-cHW-cWW-tWH-cWW-F-tSW-tWS-cSH-cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
7M4W|1|a|U|1113
7M4W|1|a|U|1114
7M4W|1|a|U|1115
*
7M4W|1|a|A|1152
7M4W|1|a|U|1153
7M4W|1|a|A|1154
7M4W|1|a|C|1155
7M4W|1|a|U|1156
7M4W|1|a|G|1157
7M4W|1|a|C|1158
*
7M4W|1|a|G|1172
7M4W|1|a|A|1173
7M4W|1|a|G|1174
7M4W|1|a|G|1175
7M4W|1|a|A|1176
7M4W|1|a|A|1177
7M4W|1|a|G|1178
7M4W|1|a|G|1179
7M4W|1|a|C|1180
7M4W|1|a|G|1181
Current chains
- Chain a
- 16s Ribosomal RNA
Nearby chains
- Chain b
- 30S ribosomal protein S2
- Chain i
- 30S ribosomal protein S9
- Chain j
- 30S ribosomal protein S10
- Chain n
- 30S ribosomal protein S14
Coloring options: