J3_7M4Y_033
3D structure
- PDB id
- 7M4Y (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- A. baumannii Ribosome-Eravacycline complex: 70S with E-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- CGG*CUAGA*UGACG
- Length
- 13 nucleotides
- Bulged bases
- 7M4Y|1|a|A|650
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7M4Y_033 not in the Motif Atlas
- Homologous match to J3_4LFB_015
- Geometric discrepancy: 0.1162
- The information below is about J3_4LFB_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_17385.6
- Basepair signature
- cWW-F-cWW-cWW-F-F-F-cWW
- Number of instances in this motif group
- 6
Unit IDs
7M4Y|1|a|C|583
7M4Y|1|a|G|584
7M4Y|1|a|G|585
*
7M4Y|1|a|C|648
7M4Y|1|a|U|649
7M4Y|1|a|A|650
7M4Y|1|a|G|651
7M4Y|1|a|A|652
*
7M4Y|1|a|U|748
7M4Y|1|a|G|749
7M4Y|1|a|A|750
7M4Y|1|a|C|751
7M4Y|1|a|G|752
Current chains
- Chain a
- 16s Ribosomal RNA
Nearby chains
- Chain h
- 30S ribosomal protein S8
- Chain l
- 30S ribosomal protein S12
- Chain o
- 30S ribosomal protein S15
- Chain q
- 30S ribosomal protein S17
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