J3_7M4Z_023
3D structure
- PDB id
- 7M4Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- A. baumannii Ribosome-Eravacycline complex: 70S with hpf
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.92 Å
Loop
- Sequence
- UG*UGUUG*CGCAA
- Length
- 12 nucleotides
- Bulged bases
- 7M4Z|1|a|A|1098
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7M4Z_023 not in the Motif Atlas
- Homologous match to J3_6CZR_024
- Geometric discrepancy: 0.2213
- The information below is about J3_6CZR_024
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_04260.1
- Basepair signature
- cWW-F-F-F-F-F-cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
7M4Z|1|a|U|1070
7M4Z|1|a|G|1071
*
7M4Z|1|a|U|1080
7M4Z|1|a|G|1081
7M4Z|1|a|U|1082
7M4Z|1|a|U|1083
7M4Z|1|a|G|1084
*
7M4Z|1|a|C|1095
7M4Z|1|a|G|1096
7M4Z|1|a|C|1097
7M4Z|1|a|A|1098
7M4Z|1|a|A|1099
Current chains
- Chain a
- 16s Ribosomal RNA
Nearby chains
- Chain b
- 30S ribosomal protein S2
- Chain e
- 30S ribosomal protein S5
Coloring options: