J3_7M4Z_030

3D structure

PDB id

7M4Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-Eravacycline complex: 70S with hpf

Experimental method

ELECTRON MICROSCOPY

Resolution

2.92 Å

Loop

Sequence

CUCAG*CGUAGAG*CAAAAG

Length

18 nucleotides

Bulged bases

7M4Z|1|A|A|2330, 7M4Z|1|A|A|2332

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7M4Z|1|A|C|2291
7M4Z|1|A|U|2292
7M4Z|1|A|C|2293
7M4Z|1|A|A|2294
7M4Z|1|A|G|2295
*
7M4Z|1|A|C|2313
7M4Z|1|A|G|2314
7M4Z|1|A|U|2315
7M4Z|1|A|A|2316
7M4Z|1|A|G|2317
7M4Z|1|A|A|2318
7M4Z|1|A|G|2319
*
7M4Z|1|A|C|2328
7M4Z|1|A|A|2329
7M4Z|1|A|A|2330
7M4Z|1|A|A|2331
7M4Z|1|A|A|2332
7M4Z|1|A|G|2333

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain B

5S ribosomal RNA; 5S rRNA

Chain F

50S ribosomal protein L5

Chain N

50S ribosomal protein L18

Chain V

50S ribosomal protein L27