J3_7MPI_005

3D structure

PDB id

7MPI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Stm1 bound vacant 80S structure isolated from cbf5-D95A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

UAG*CGUA(OMG)C*GUCGA

Length

14 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7MPI|1|A1|U|829
7MPI|1|A1|A|830
7MPI|1|A1|G|831
*
7MPI|1|A1|C|863
7MPI|1|A1|G|864
7MPI|1|A1|U|865
7MPI|1|A1|A|866
7MPI|1|A1|OMG|867
7MPI|1|A1|C|868
*
7MPI|1|A1|G|891
7MPI|1|A1|U|892
7MPI|1|A1|C|893
7MPI|1|A1|G|894
7MPI|1|A1|A|895

Current chains

Chain A1

25S rRNA

Nearby chains

Chain AA

60S ribosomal protein L2-A

Chain AR

60S ribosomal protein L19-A

Chain Ag

60S ribosomal protein L34-A

Chain Aj

60S ribosomal protein L37-A

Chain Ap

60S ribosomal protein L43-A