J3_7MQ8_005

3D structure

PDB id

7MQ8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human SSU processome, state pre-A1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GUGG*UUG*CGAUAAC

Length

14 nucleotides

Bulged bases

7MQ8|1|L1|A|1378

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7MQ8|1|L1|G|1349
7MQ8|1|L1|U|1350
7MQ8|1|L1|G|1351
7MQ8|1|L1|G|1352
*
7MQ8|1|L1|U|1359
7MQ8|1|L1|U|1364
7MQ8|1|L1|G|1365
*
7MQ8|1|L1|C|1374
7MQ8|1|L1|G|1375
7MQ8|1|L1|A|1376
7MQ8|1|L1|U|1377
7MQ8|1|L1|A|1378
7MQ8|1|L1|A|1379
7MQ8|1|L1|C|1380

Current chains

Chain L1

18S rRNA

Nearby chains