J3_7MQ8_007
3D structure
- PDB id
- 7MQ8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the human SSU processome, state pre-A1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UGAGCG*CGUU*AG
- Length
- 12 nucleotides
- Bulged bases
- 7MQ8|1|L2|C|109
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7MQ8|1|L2|U|105
7MQ8|1|L2|G|106
7MQ8|1|L2|A|107
7MQ8|1|L2|G|108
7MQ8|1|L2|C|109
7MQ8|1|L2|G|110
*
7MQ8|1|L2|C|165
7MQ8|1|L2|G|166
7MQ8|1|L2|U|167
7MQ8|1|L2|U|168
*
7MQ8|1|L2|A|193
7MQ8|1|L2|G|194
Current chains
- Chain L2
- U3 snoRNA
Nearby chains
- Chain NB
- Something about silencing protein 10
- Chain SA
- Nucleolar protein 56
- Chain SD
- rRNA 2'-O-methyltransferase fibrillarin
- Chain SF
- NHP2-like protein 1
- Chain SQ
- Deoxynucleotidyltransferase terminal-interacting protein 2
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