J3_7MQ8_010
3D structure
- PDB id
- 7MQ8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the human SSU processome, state pre-A1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UGGA*UUAAGAG*CAUUA
- Length
- 16 nucleotides
- Bulged bases
- 7MQ8|1|L1|G|921
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7MQ8|1|L1|U|682
7MQ8|1|L1|G|683
7MQ8|1|L1|G|684
7MQ8|1|L1|A|685
*
7MQ8|1|L1|U|917
7MQ8|1|L1|U|918
7MQ8|1|L1|A|919
7MQ8|1|L1|A|920
7MQ8|1|L1|G|921
7MQ8|1|L1|A|922
7MQ8|1|L1|G|923
*
7MQ8|1|L1|C|1019
7MQ8|1|L1|A|1020
7MQ8|1|L1|U|1021
7MQ8|1|L1|U|1022
7MQ8|1|L1|A|1023
Current chains
- Chain L1
- 18S rRNA
Nearby chains
- Chain L7
- 40S ribosomal protein S7
- Chain NF
- 40S ribosomal protein S13
- Chain NO
- 40S ribosomal protein S15a
- Chain NQ
- 40S ribosomal protein S27
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