J3_7MQ9_004

3D structure

PDB id

7MQ9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human SSU processome, state pre-A1*

Experimental method

ELECTRON MICROSCOPY

Resolution

3.87 Å

Loop

Sequence

UCG*CGAGACU*AGCAAUA

Length

17 nucleotides

Bulged bases

7MQ9|1|L1|A|1484

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7MQ9|1|L1|U|1340
7MQ9|1|L1|C|1341
7MQ9|1|L1|G|1345
*
7MQ9|1|L1|C|1384
7MQ9|1|L1|G|1385
7MQ9|1|L1|A|1386
7MQ9|1|L1|G|1387
7MQ9|1|L1|A|1388
7MQ9|1|L1|C|1389
7MQ9|1|L1|U|1390
*
7MQ9|1|L1|A|1480
7MQ9|1|L1|G|1481
7MQ9|1|L1|C|1482
7MQ9|1|L1|A|1483
7MQ9|1|L1|A|1484
7MQ9|1|L1|U|1485
7MQ9|1|L1|A|1486

Current chains

Chain L1

18S rRNA

Nearby chains

Chain NR

RRP12-like protein

Chain NU

40S ribosomal protein S17