J3_7MQ9_009

3D structure

PDB id

7MQ9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human SSU processome, state pre-A1*

Experimental method

ELECTRON MICROSCOPY

Resolution

3.87 Å

Loop

Sequence

UGGA*UUAAGA*UA

Length

12 nucleotides

Bulged bases

7MQ9|1|L1|G|921

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7MQ9|1|L1|U|682
7MQ9|1|L1|G|683
7MQ9|1|L1|G|684
7MQ9|1|L1|A|685
*
7MQ9|1|L1|U|917
7MQ9|1|L1|U|918
7MQ9|1|L1|A|919
7MQ9|1|L1|A|920
7MQ9|1|L1|G|921
7MQ9|1|L1|A|922
*
7MQ9|1|L1|U|1022
7MQ9|1|L1|A|1023

Current chains

Chain L1

18S rRNA

Nearby chains

Chain L7

40S ribosomal protein S7

Chain NF

40S ribosomal protein S13

Chain NO

40S ribosomal protein S15a

Chain NQ

40S ribosomal protein S27