J3_7MSC_009

3D structure

PDB id

7MSC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Pre_R0 state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.97 Å

Loop

Sequence

UCGGGAC*GACAA*UA

Length

14 nucleotides

Bulged bases

7MSC|1|A|A|1515

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7MSC_009 not in the Motif Atlas

Homologous match to J3_7RQB_009

Geometric discrepancy: 0.1481

The information below is about J3_7RQB_009

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_04858.2

Basepair signature

cWW-F-cWW-F-F-F-F-F-cWW

Number of instances in this motif group

3

Unit IDs

7MSC|1|A|U|1475
7MSC|1|A|C|1476
7MSC|1|A|G|1477
7MSC|1|A|G|1478
7MSC|1|A|G|1479
7MSC|1|A|A|1480
7MSC|1|A|C|1481
*
7MSC|1|A|G|1512
7MSC|1|A|A|1513
7MSC|1|A|C|1514
7MSC|1|A|A|1515
7MSC|1|A|A|1516
*
7MSC|1|A|U|1533
7MSC|1|A|A|1534

Current chains

Chain A

23S rRNA

Nearby chains

Chain T

50S ribosomal protein L23