3D structure

PDB id
7MSC (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mtb 70SIC in complex with MtbEttA at Pre_R0 state
Experimental method
ELECTRON MICROSCOPY
Resolution
2.97 Å

Loop

Sequence
UG*CACCGGUGG*CGG
Length
14 nucleotides
Bulged bases
7MSC|1|a|U|714
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_7MSC_019 not in the Motif Atlas
Homologous match to J3_6CZR_017
Geometric discrepancy: 0.1888
The information below is about J3_6CZR_017
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_11934.3
Basepair signature
cWW-F-cWW-F-F-tWW-F-cWW-F
Number of instances in this motif group
5

Unit IDs

7MSC|1|a|U|663
7MSC|1|a|G|664
*
7MSC|1|a|C|708
7MSC|1|a|A|709
7MSC|1|a|C|710
7MSC|1|a|C|711
7MSC|1|a|G|712
7MSC|1|a|G|713
7MSC|1|a|U|714
7MSC|1|a|G|715
7MSC|1|a|G|716
*
7MSC|1|a|C|723
7MSC|1|a|G|724
7MSC|1|a|G|725

Current chains

Chain a
16S rRNA

Nearby chains

Chain C
50S ribosomal protein L2
Chain f
30S ribosomal protein S6
Chain k
30S ribosomal protein S11
Chain o
30S ribosomal protein S15
Chain r
30S ribosomal protein S18 1

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.0839 s