J3_7MSC_024
3D structure
- PDB id
- 7MSC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mtb 70SIC in complex with MtbEttA at Pre_R0 state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.97 Å
Loop
- Sequence
- CGUCAG*CGCAACC*GAUGACG
- Length
- 20 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7MSC_024 not in the Motif Atlas
- Homologous match to J3_4LFB_007
- Geometric discrepancy: 0.1304
- The information below is about J3_4LFB_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_08394.3
- Basepair signature
- cWW-tSS-F-F-tWH-F-F-cWW-F-cWW-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
7MSC|1|a|C|1054
7MSC|1|a|G|1055
7MSC|1|a|U|1056
7MSC|1|a|C|1057
7MSC|1|a|A|1058
7MSC|1|a|G|1059
*
7MSC|1|a|C|1098
7MSC|1|a|G|1099
7MSC|1|a|C|1100
7MSC|1|a|A|1101
7MSC|1|a|A|1102
7MSC|1|a|C|1103
7MSC|1|a|C|1104
*
7MSC|1|a|G|1179
7MSC|1|a|A|1180
7MSC|1|a|U|1181
7MSC|1|a|G|1182
7MSC|1|a|A|1183
7MSC|1|a|C|1184
7MSC|1|a|G|1185
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain c
- 30S ribosomal protein S3
- Chain e
- 30S ribosomal protein S5
- Chain g
- 30S ribosomal protein S7
- Chain i
- 30S ribosomal protein S9
- Chain j
- 30S ribosomal protein S10
- Chain n
- 30S ribosomal protein S14 type Z
Coloring options: