J3_7MSC_025

3D structure

PDB id

7MSC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Pre_R0 state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.97 Å

Loop

Sequence

UG*UGUUG*CGCAA

Length

12 nucleotides

Bulged bases

7MSC|1|a|A|1092

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7MSC_025 not in the Motif Atlas

Homologous match to J3_5J7L_009

Geometric discrepancy: 0.1044

The information below is about J3_5J7L_009

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_76043.3

Basepair signature

cWW-cWW-tSS-F-F-F-F-cWW

Number of instances in this motif group

3

Unit IDs

7MSC|1|a|U|1064
7MSC|1|a|G|1065
*
7MSC|1|a|U|1074
7MSC|1|a|G|1075
7MSC|1|a|U|1076
7MSC|1|a|U|1077
7MSC|1|a|G|1078
*
7MSC|1|a|C|1089
7MSC|1|a|G|1090
7MSC|1|a|C|1091
7MSC|1|a|A|1092
7MSC|1|a|A|1093

Current chains

Chain a

16S rRNA

Nearby chains

Chain e

30S ribosomal protein S5