J3_7MSH_013

3D structure

PDB id

7MSH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Pre_R1 state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

CAUC*GUU*AUUAAAG

Length

14 nucleotides

Bulged bases

7MSH|1|A|A|2756, 7MSH|1|A|U|2757

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7MSH_013 not in the Motif Atlas

Homologous match to J3_7RQB_012

Geometric discrepancy: 0.1314

The information below is about J3_7RQB_012

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_32601.3

Basepair signature

cWW-tWH-cHW-tSH-cWW-tSS-F-cSS-cWW

Number of instances in this motif group

4

Unit IDs

7MSH|1|A|C|2755
7MSH|1|A|A|2756
7MSH|1|A|U|2757
7MSH|1|A|C|2758
*
7MSH|1|A|G|2783
7MSH|1|A|U|2784
7MSH|1|A|U|2785
*
7MSH|1|A|A|2799
7MSH|1|A|U|2800
7MSH|1|A|U|2801
7MSH|1|A|A|2802
7MSH|1|A|A|2803
7MSH|1|A|A|2804
7MSH|1|A|G|2805

Current chains

Chain A

23S rRNA

Nearby chains

Chain J

50S ribosomal protein L13

Chain K

50S ribosomal protein L14