J3_7MSM_026

3D structure

PDB id

7MSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Trans_R0 state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.79 Å

Loop

Sequence

UG*UGUUG*CGCAA

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7MSM_026 not in the Motif Atlas

Homologous match to J3_6CZR_024

Geometric discrepancy: 0.1671

The information below is about J3_6CZR_024

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_04260.1

Basepair signature

cWW-F-F-F-F-F-cWW-cWW

Number of instances in this motif group

2

Unit IDs

7MSM|1|a|U|1064
7MSM|1|a|G|1065
*
7MSM|1|a|U|1074
7MSM|1|a|G|1075
7MSM|1|a|U|1076
7MSM|1|a|U|1077
7MSM|1|a|G|1078
*
7MSM|1|a|C|1089
7MSM|1|a|G|1090
7MSM|1|a|C|1091
7MSM|1|a|A|1092
7MSM|1|a|A|1093

Current chains

Chain a

16S rRNA

Nearby chains

Chain e

30S ribosomal protein S5