J3_7MSZ_001

3D structure

PDB id

7MSZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Trans_R1 state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GC*GUGAAAAG*CC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7MSZ_001 not in the Motif Atlas

Homologous match to J3_7RQB_001

Geometric discrepancy: 0.0991

The information below is about J3_7RQB_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_65070.3

Basepair signature

cWW-tWH-cWW-tSH-F-cWW-F

Number of instances in this motif group

4

Unit IDs

7MSZ|1|A|G|30
7MSZ|1|A|C|31
*
7MSZ|1|A|G|563
7MSZ|1|A|U|564
7MSZ|1|A|G|565
7MSZ|1|A|A|566
7MSZ|1|A|A|567
7MSZ|1|A|A|568
7MSZ|1|A|A|569
7MSZ|1|A|G|570
*
7MSZ|1|A|C|597
7MSZ|1|A|C|598

Current chains

Chain A

23S rRNA

Nearby chains

Chain Q

50S ribosomal protein L20

Chain S

50S ribosomal protein L22

Chain U

50S ribosomal protein L24