J3_7MSZ_008

3D structure

PDB id

7MSZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Trans_R1 state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UCGGGAC*GACAA*UA

Length

14 nucleotides

Bulged bases

7MSZ|1|A|A|1515

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7MSZ_008 not in the Motif Atlas

Homologous match to J3_7RQB_009

Geometric discrepancy: 0.1489

The information below is about J3_7RQB_009

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_04858.2

Basepair signature

cWW-F-cWW-F-F-F-F-F-cWW

Number of instances in this motif group

3

Unit IDs

7MSZ|1|A|U|1475
7MSZ|1|A|C|1476
7MSZ|1|A|G|1477
7MSZ|1|A|G|1478
7MSZ|1|A|G|1479
7MSZ|1|A|A|1480
7MSZ|1|A|C|1481
*
7MSZ|1|A|G|1512
7MSZ|1|A|A|1513
7MSZ|1|A|C|1514
7MSZ|1|A|A|1515
7MSZ|1|A|A|1516
*
7MSZ|1|A|U|1533
7MSZ|1|A|A|1534

Current chains

Chain A

23S rRNA

Nearby chains

Chain T

50S ribosomal protein L23