J3_7MSZ_012
3D structure
- PDB id
- 7MSZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mtb 70SIC in complex with MtbEttA at Trans_R1 state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CUC*GAG*CACAAG
- Length
- 12 nucleotides
- Bulged bases
- 7MSZ|1|A|C|2572, 7MSZ|1|A|A|2574
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7MSZ_012 not in the Motif Atlas
- Homologous match to J3_4WF9_008
- Geometric discrepancy: 0.1642
- The information below is about J3_4WF9_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_05327.2
- Basepair signature
- cWW-tWH-tWW-cWW-F-cWW
- Number of instances in this motif group
- 11
Unit IDs
7MSZ|1|A|C|2533
7MSZ|1|A|U|2534
7MSZ|1|A|C|2535
*
7MSZ|1|A|G|2559
7MSZ|1|A|A|2560
7MSZ|1|A|G|2561
*
7MSZ|1|A|C|2570
7MSZ|1|A|A|2571
7MSZ|1|A|C|2572
7MSZ|1|A|A|2573
7MSZ|1|A|A|2574
7MSZ|1|A|G|2575
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain F
- 50S ribosomal protein L5
- Chain O
- 50S ribosomal protein L18
- Chain W
- 50S ribosomal protein L27
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