3D structure

PDB id
7MT3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mtb 70S with P/E tRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
2.8 Å

Loop

Sequence
CAAUG*CUCAGUUC*GUCG
Length
17 nucleotides
Bulged bases
7MT3|1|a|U|1232, 7MT3|1|a|U|1294
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_7MT3_026 not in the Motif Atlas
Homologous match to J3_4LFB_009
Geometric discrepancy: 0.1445
The information below is about J3_4LFB_009
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_37047.6
Basepair signature
cWW-cSS-tHW-F-F-F-cWW-cWW-F-cSH-F-F
Number of instances in this motif group
4

Unit IDs

7MT3|1|a|C|1229
7MT3|1|a|A|1230
7MT3|1|a|A|1231
7MT3|1|a|U|1232
7MT3|1|a|G|1233
*
7MT3|1|a|C|1288
7MT3|1|a|U|1289
7MT3|1|a|C|1290
7MT3|1|a|A|1291
7MT3|1|a|G|1292
7MT3|1|a|U|1293
7MT3|1|a|U|1294
7MT3|1|a|C|1295
*
7MT3|1|a|G|1326
7MT3|1|a|U|1327
7MT3|1|a|C|1328
7MT3|1|a|G|1329

Current chains

Chain a
16S rRNA

Nearby chains

Chain g
30S ribosomal protein S7
Chain m
30S ribosomal protein S13

Coloring options:


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