3D structure

PDB id
7MT3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mtb 70S with P/E tRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
2.8 Å

Loop

Sequence
GGAAG*UGCCGUAGAC*GGUAC
Length
20 nucleotides
Bulged bases
7MT3|1|A|U|404
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_7MT3_030 not in the Motif Atlas
Homologous match to J3_4WF9_015
Geometric discrepancy: 0.1347
The information below is about J3_4WF9_015
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_46299.2
Basepair signature
cWW-F-F-F-cHH-cWW-tHS-F-cWW-cSW-tHS-cWW
Number of instances in this motif group
3

Unit IDs

7MT3|1|A|G|379
7MT3|1|A|G|380
7MT3|1|A|A|381
7MT3|1|A|A|382
7MT3|1|A|G|383
*
7MT3|1|A|U|399
7MT3|1|A|G|400
7MT3|1|A|C|401
7MT3|1|A|C|402
7MT3|1|A|G|403
7MT3|1|A|U|404
7MT3|1|A|A|405
7MT3|1|A|G|406
7MT3|1|A|A|407
7MT3|1|A|C|408
*
7MT3|1|A|G|420
7MT3|1|A|G|421
7MT3|1|A|U|422
7MT3|1|A|A|423
7MT3|1|A|C|424

Current chains

Chain A
23S rRNA

Nearby chains

Chain E
50S ribosomal protein L4
Chain U
50S ribosomal protein L24

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.1941 s