3D structure

PDB id
7MT7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mtb 70S with P and E site tRNAs
Experimental method
ELECTRON MICROSCOPY
Resolution
2.71 Å

Loop

Sequence
GC*GUGAAAAGUAC*GAGUGAAAGAGUACC
Length
28 nucleotides
Bulged bases
7MT7|1|A|G|592, 7MT7|1|A|A|596
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_7MT7_029 not in the Motif Atlas
Homologous match to J3_5J7L_066
Geometric discrepancy: 0.1558
The information below is about J3_5J7L_066
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_92134.2
Basepair signature
cWW-cWW-cWW-F-tWH-cSS-tSS-tSH-tSH-tWW-tHH-tWH-tWW-F-F-cSS-cSW-F-tHS-cWW
Number of instances in this motif group
6

Unit IDs

7MT7|1|A|G|30
7MT7|1|A|C|31
*
7MT7|1|A|G|563
7MT7|1|A|U|564
7MT7|1|A|G|565
7MT7|1|A|A|566
7MT7|1|A|A|567
7MT7|1|A|A|568
7MT7|1|A|A|569
7MT7|1|A|G|570
7MT7|1|A|U|571
7MT7|1|A|A|572
7MT7|1|A|C|573
*
7MT7|1|A|G|584
7MT7|1|A|A|585
7MT7|1|A|G|586
7MT7|1|A|U|587
7MT7|1|A|G|588
7MT7|1|A|A|589
7MT7|1|A|A|590
7MT7|1|A|A|591
7MT7|1|A|G|592
7MT7|1|A|A|593
7MT7|1|A|G|594
7MT7|1|A|U|595
7MT7|1|A|A|596
7MT7|1|A|C|597
7MT7|1|A|C|598

Current chains

Chain A
23S rRNA

Nearby chains

Chain Q
50S ribosomal protein L20
Chain S
50S ribosomal protein L22
Chain U
50S ribosomal protein L24

Coloring options:


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