J3_7N2C_002

3D structure

PDB id

7N2C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.72 Å

Loop

Sequence

CGG*CUUG*CG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7N2C_002 not in the Motif Atlas

Homologous match to J3_5J7L_002

Geometric discrepancy: 0.1139

The information below is about J3_5J7L_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_56052.5

Basepair signature

cWW-F-cWW-cWW-F

Number of instances in this motif group

5

Unit IDs

7N2C|1|16|C|586
7N2C|1|16|G|587
7N2C|1|16|G|588
*
7N2C|1|16|C|651
7N2C|1|16|U|652
7N2C|1|16|U|653
7N2C|1|16|G|654
*
7N2C|1|16|C|754
7N2C|1|16|G|755

Current chains

Chain 16

16S rRNA

Nearby chains

Chain SH

30S ribosomal protein S8

Chain SL

30S ribosomal protein S12

Chain SO

30S ribosomal protein S15

Chain SQ

30S ribosomal protein S17