J3_7N2C_015

3D structure

PDB id

7N2C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.72 Å

Loop

Sequence

UGAUCUA*UGG*CAAA

Length

14 nucleotides

Bulged bases

7N2C|1|23|U|686, 7N2C|1|23|A|792

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7N2C_015 not in the Motif Atlas

Homologous match to J3_5J7L_038

Geometric discrepancy: 0.0559

The information below is about J3_5J7L_038

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_64189.2

Basepair signature

cWW-tWH-cWW-tSW-F-F-cWW

Number of instances in this motif group

7

Unit IDs

7N2C|1|23|U|683
7N2C|1|23|G|684
7N2C|1|23|A|685
7N2C|1|23|U|686
7N2C|1|23|C|687
7N2C|1|23|U|688
7N2C|1|23|A|689
*
7N2C|1|23|U|773
7N2C|1|23|G|774
7N2C|1|23|G|775
*
7N2C|1|23|C|791
7N2C|1|23|A|792
7N2C|1|23|A|793
7N2C|1|23|A|794

Current chains

Chain 23

23S rRNA

Nearby chains

Chain LB

50S ribosomal protein L2

Chain Lh

50S ribosomal protein L34