J3_7N2C_023

3D structure

PDB id

7N2C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.72 Å

Loop

Sequence

CAUC*GUA*UUUAAAG

Length

14 nucleotides

Bulged bases

7N2C|1|23|A|2518, 7N2C|1|23|U|2519

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7N2C_023 not in the Motif Atlas

Homologous match to J3_5J7L_046

Geometric discrepancy: 0.0781

The information below is about J3_5J7L_046

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_32601.5

Basepair signature

cWW-tWH-cHW-F-cWW-tSS-F-cWW

Number of instances in this motif group

4

Unit IDs

7N2C|1|23|C|2517
7N2C|1|23|A|2518
7N2C|1|23|U|2519
7N2C|1|23|C|2520
*
7N2C|1|23|G|2545
7N2C|1|23|U|2546
7N2C|1|23|A|2547
*
7N2C|1|23|U|2561
7N2C|1|23|U|2562
7N2C|1|23|U|2563
7N2C|1|23|A|2564
7N2C|1|23|A|2565
7N2C|1|23|A|2566
7N2C|1|23|G|2567

Current chains

Chain 23

23S rRNA

Nearby chains

Chain LC

50S ribosomal protein L3

Chain LN

50S ribosomal protein L14