J3_7N2C_030

3D structure

PDB id

7N2C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.72 Å

Loop

Sequence

CUUGACAU*ACAG*CUUACG

Length

18 nucleotides

Bulged bases

7N2C|1|16|U|1212, 7N2C|1|16|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7N2C_030 not in the Motif Atlas

Homologous match to J3_5J7L_053

Geometric discrepancy: 0.1148

The information below is about J3_5J7L_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_76475.2

Basepair signature

cWW-tWH-F-tHS-cWW-cWW-F-cWS-cWS-cWW

Number of instances in this motif group

2

Unit IDs

7N2C|1|16|C|990
7N2C|1|16|U|991
7N2C|1|16|U|992
7N2C|1|16|G|993
7N2C|1|16|A|994
7N2C|1|16|C|995
7N2C|1|16|A|996
7N2C|1|16|U|997
*
7N2C|1|16|A|1044
7N2C|1|16|C|1045
7N2C|1|16|A|1046
7N2C|1|16|G|1047
*
7N2C|1|16|C|1210
7N2C|1|16|U|1211
7N2C|1|16|U|1212
7N2C|1|16|A|1213
7N2C|1|16|C|1214
7N2C|1|16|G|1215

Current chains

Chain 16

16S rRNA

Nearby chains

Chain EF

Elongation factor G

Chain SN

30S ribosomal protein S14