3D structure

PDB id
7NAC (explore in PDB, NAKB, or RNA 3D Hub)
Description
State E2 nucleolar 60S ribosomal biogenesis intermediate - Composite model
Experimental method
ELECTRON MICROSCOPY
Resolution
3.04 Å

Loop

Sequence
CAGACAUG*UGGG*CAUAAUG
Length
19 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7NAC|1|1|C|435
7NAC|1|1|A|436
7NAC|1|1|G|437
7NAC|1|1|A|438
7NAC|1|1|C|439
7NAC|1|1|A|440
7NAC|1|1|U|441
7NAC|1|1|G|442
*
7NAC|1|1|U|492
7NAC|1|1|G|493
7NAC|1|1|G|494
7NAC|1|1|G|495
*
7NAC|1|1|C|618
7NAC|1|1|A|619
7NAC|1|1|U|620
7NAC|1|1|A|621
7NAC|1|1|A|622
7NAC|1|1|U|623
7NAC|1|1|G|624

Current chains

Chain 1
25S rRNA

Nearby chains

Chain E
60S ribosomal protein L6-A
Chain P
60S ribosomal protein L17-A
Chain e
60S ribosomal protein L32
Chain f
60S ribosomal protein L33-A

Coloring options:

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