J3_7NAC_016

3D structure

PDB id

7NAC (explore in PDB, NAKB, or RNA 3D Hub)

Description

State E2 nucleolar 60S ribosomal biogenesis intermediate - Composite model

Experimental method

ELECTRON MICROSCOPY

Resolution

3.04 Å

Loop

Sequence

GACG*CGCUAAGG*CAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NAC|1|1|G|1230
7NAC|1|1|A|1231
7NAC|1|1|C|1232
7NAC|1|1|G|1233
*
7NAC|1|1|C|1255
7NAC|1|1|G|1256
7NAC|1|1|C|1257
7NAC|1|1|U|1258
7NAC|1|1|A|1259
7NAC|1|1|A|1260
7NAC|1|1|G|1261
7NAC|1|1|G|1262
*
7NAC|1|1|C|1277
7NAC|1|1|A|1278
7NAC|1|1|C|1279

Current chains

Chain 1

25S rRNA

Nearby chains

Chain W

Ribosome assembly factor MRT4

Chain r

Ribosome biogenesis protein NSA2