J3_7NAW_001

3D structure

PDB id

7NAW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial 30S ribosomal subunit assembly complex state B (Consensus Refinement)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.05 Å

Loop

Sequence

GC*GGAAUAU*AGC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7NAW_001 not in the Motif Atlas

Geometric match to J3_8B0X_001

Geometric discrepancy: 0.0713

The information below is about J3_8B0X_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_58657.1

Basepair signature

cWW-cWW-cSW-cWW-F-F-F-F

Number of instances in this motif group

5

Unit IDs

7NAW|1|A|G|46
7NAW|1|A|C|47
*
7NAW|1|A|G|361
7NAW|1|A|G|362
7NAW|1|A|A|363
7NAW|1|A|A|364
7NAW|1|A|U|365
7NAW|1|A|A|366
7NAW|1|A|U|367
*
7NAW|1|A|A|393
7NAW|1|A|G|394
7NAW|1|A|C|395

Current chains

Chain A

16S rRNA

Nearby chains

Chain L

Small ribosomal subunit protein uS12

Chain P

Small ribosomal subunit protein bS16