J3_7NAW_008

3D structure

PDB id

7NAW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial 30S ribosomal subunit assembly complex state B (Consensus Refinement)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.05 Å

Loop

Sequence

UGGA*UAC*GGAA

Length

11 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7NAW_008 not in the Motif Atlas

Homologous match to J3_6CZR_019

Geometric discrepancy: 0.161

The information below is about J3_6CZR_019

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NAW|1|A|U|943
7NAW|1|A|G|944
7NAW|1|A|G|945
7NAW|1|A|A|946
*
7NAW|1|A|U|1235
7NAW|1|A|A|1236
7NAW|1|A|C|1237
*
7NAW|1|A|G|1337
7NAW|1|A|G|1338
7NAW|1|A|A|1339
7NAW|1|A|A|1340

Current chains

Chain A

16S rRNA

Nearby chains

Chain I

Small ribosomal subunit protein uS9

Chain M

Small ribosomal subunit protein uS13