J3_7NHK_009
3D structure
- PDB id
- 7NHK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- LsaA, an antibiotic resistance ABCF, in complex with 70S ribosome from Enterococcus faecalis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UCGGGAC*GACAA*UA
- Length
- 14 nucleotides
- Bulged bases
- 7NHK|1|A|A|1419
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7NHK_009 not in the Motif Atlas
- Homologous match to J3_7RQB_009
- Geometric discrepancy: 0.1387
- The information below is about J3_7RQB_009
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_04858.2
- Basepair signature
- cWW-F-cWW-F-F-F-F-F-cWW
- Number of instances in this motif group
- 3
Unit IDs
7NHK|1|A|U|1379
7NHK|1|A|C|1380
7NHK|1|A|G|1381
7NHK|1|A|G|1382
7NHK|1|A|G|1383
7NHK|1|A|A|1384
7NHK|1|A|C|1385
*
7NHK|1|A|G|1416
7NHK|1|A|A|1417
7NHK|1|A|C|1418
7NHK|1|A|A|1419
7NHK|1|A|A|1420
*
7NHK|1|A|U|1437
7NHK|1|A|A|1438
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain W
- 50S ribosomal protein L23
Coloring options: