J3_7NHK_012
3D structure
- PDB id
- 7NHK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- LsaA, an antibiotic resistance ABCF, in complex with 70S ribosome from Enterococcus faecalis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CAUC*GUU*AUUAAAG
- Length
- 14 nucleotides
- Bulged bases
- 7NHK|1|A|A|2531, 7NHK|1|A|U|2532
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7NHK_012 not in the Motif Atlas
- Homologous match to J3_4WF9_009
- Geometric discrepancy: 0.1011
- The information below is about J3_4WF9_009
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_32601.6
- Basepair signature
- cWW-cWH-cWW-tWH-tSS-F-cWW-F
- Number of instances in this motif group
- 4
Unit IDs
7NHK|1|A|C|2530
7NHK|1|A|A|2531
7NHK|1|A|U|2532
7NHK|1|A|C|2533
*
7NHK|1|A|G|2558
7NHK|1|A|U|2559
7NHK|1|A|U|2560
*
7NHK|1|A|A|2574
7NHK|1|A|U|2575
7NHK|1|A|U|2576
7NHK|1|A|A|2577
7NHK|1|A|A|2578
7NHK|1|A|A|2579
7NHK|1|A|G|2580
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain N
- 50S ribosomal protein L14
Coloring options: