J3_7NQL_014
3D structure
- PDB id
- 7NQL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S mammalian mitochondrial ribosome with ICT1 and P site tRNAMet
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CACC*GUU*AUUAAAG
- Length
- 14 nucleotides
- Bulged bases
- 7NQL|1|BA|A|1341, 7NQL|1|BA|C|1342
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7NQL_014 not in the Motif Atlas
- Homologous match to J3_7RQB_012
- Geometric discrepancy: 0.1553
- The information below is about J3_7RQB_012
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_32601.3
- Basepair signature
- cWW-tWH-cHW-tSH-cWW-tSS-F-cSS-cWW
- Number of instances in this motif group
- 4
Unit IDs
7NQL|1|BA|C|1340
7NQL|1|BA|A|1341
7NQL|1|BA|C|1342
7NQL|1|BA|C|1343
*
7NQL|1|BA|G|1368
7NQL|1|BA|U|1369
7NQL|1|BA|U|1370
*
7NQL|1|BA|A|1384
7NQL|1|BA|U|1385
7NQL|1|BA|U|1386
7NQL|1|BA|A|1387
7NQL|1|BA|A|1388
7NQL|1|BA|A|1389
7NQL|1|BA|G|1390
Current chains
- Chain BA
- 16S rRNA
Nearby chains
- Chain BE
- ICT1
- Chain BL
- Peptidyl-tRNA hydrolase ICT1, mitochondrial
- Chain BO
- uL14m
- Chain Bt
- Mitochondrial ribosomal protein L57
- Chain Bx
- Mitochondrial ribosomal protein S18A
Coloring options: