J3_7NRD_039
3D structure
- PDB id
- 7NRD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast Gcn1 bound to a colliding stalled 80S ribosome with MBF1, A/P-tRNA and P/E-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.36 Å
Loop
- Sequence
- UCAAAG*CGCAAAU*AGUGACAA
- Length
- 21 nucleotides
- Bulged bases
- 7NRD|1|S2|A|468
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7NRD|1|S2|U|37
7NRD|1|S2|C|38
7NRD|1|S2|A|39
7NRD|1|S2|A|40
7NRD|1|S2|A|41
7NRD|1|S2|G|42
*
7NRD|1|S2|C|433
7NRD|1|S2|G|434
7NRD|1|S2|C|435
7NRD|1|S2|A|436
7NRD|1|S2|A|437
7NRD|1|S2|A|438
7NRD|1|S2|U|439
*
7NRD|1|S2|A|464
7NRD|1|S2|G|465
7NRD|1|S2|U|466
7NRD|1|S2|G|467
7NRD|1|S2|A|468
7NRD|1|S2|C|469
7NRD|1|S2|A|470
7NRD|1|S2|A|471
Current chains
- Chain S2
- TPA_inf: Saccharomyces cerevisiae S288C chromosome XII, complete sequence
Nearby chains
- Chain SS
- 40S ribosomal protein S4-A
- Chain SW
- 40S ribosomal protein S9-A
- Chain Sc
- 40S ribosomal protein S23-A
Coloring options: