J3_7NWG_004

3D structure

PDB id

7NWG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GCUCUCCCACC*GGGGGC*GGGC

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWG|1|51|G|1098
7NWG|1|51|C|1099
7NWG|1|51|U|1100
7NWG|1|51|C|1101
7NWG|1|51|U|1102
7NWG|1|51|C|1103
7NWG|1|51|C|1104
7NWG|1|51|C|1105
7NWG|1|51|A|1106
7NWG|1|51|C|1107
7NWG|1|51|C|1108
*
7NWG|1|51|G|1162
7NWG|1|51|G|1163
7NWG|1|51|G|1164
7NWG|1|51|G|1165
7NWG|1|51|G|1166
7NWG|1|51|C|1167
*
7NWG|1|51|G|1194
7NWG|1|51|G|1195
7NWG|1|51|G|1196
7NWG|1|51|C|1197

Current chains

Chain 51

28S Ribosomal RNA

Nearby chains