J3_7NWG_005

3D structure

PDB id

7NWG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GUGAACUA*UAG*CGAAC

Length

16 nucleotides

Bulged bases

7NWG|1|51|A|1534, 7NWG|1|51|G|1641

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWG|1|51|G|1530
7NWG|1|51|U|1531
7NWG|1|51|G|1532
7NWG|1|51|A|1533
7NWG|1|51|A|1534
7NWG|1|51|C|1535
7NWG|1|51|U|1536
7NWG|1|51|A|1537
*
7NWG|1|51|U|1622
7NWG|1|51|A|1623
7NWG|1|51|G|1624
*
7NWG|1|51|C|1640
7NWG|1|51|G|1641
7NWG|1|51|A|1642
7NWG|1|51|A|1643
7NWG|1|51|C|1644

Current chains

Chain 51

28S Ribosomal RNA

Nearby chains

Chain A3

L8

Chain C3

uL4

Chain N3

Ribosomal protein L15

Chain j3

Ribosomal protein L37

Chain l3

eL39