J3_7NWG_020
3D structure
- PDB id
- 7NWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CUUAAUUUG*CGGGAAACCUCACC*GGCUG
- Length
- 28 nucleotides
- Bulged bases
- 7NWG|1|A2|G|1256, 7NWG|1|A2|A|1258, 7NWG|1|A2|A|1260
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7NWG|1|A2|C|1237
7NWG|1|A2|U|1238
7NWG|1|A2|U|1239
7NWG|1|A2|A|1240
7NWG|1|A2|A|1241
7NWG|1|A2|U|1242
7NWG|1|A2|U|1243
7NWG|1|A2|U|1244
7NWG|1|A2|G|1245
*
7NWG|1|A2|C|1254
7NWG|1|A2|G|1255
7NWG|1|A2|G|1256
7NWG|1|A2|G|1257
7NWG|1|A2|A|1258
7NWG|1|A2|A|1259
7NWG|1|A2|A|1260
7NWG|1|A2|C|1261
7NWG|1|A2|C|1262
7NWG|1|A2|U|1263
7NWG|1|A2|C|1264
7NWG|1|A2|A|1265
7NWG|1|A2|C|1266
7NWG|1|A2|C|1267
*
7NWG|1|A2|G|1516
7NWG|1|A2|G|1517
7NWG|1|A2|C|1518
7NWG|1|A2|U|1519
7NWG|1|A2|G|1520
Current chains
- Chain A2
- 18S Ribosomal RNA
Nearby chains
- Chain Q2
- 40S ribosomal protein uS19
- Chain R2
- Ribosomal protein S16
- Chain T2
- 40S ribosomal protein uS13
- Chain V2
- 40S ribosomal protein S20
- Chain e2
- uS14
- Chain q3
- Transfer RNA; tRNA
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