J3_7NWG_024

3D structure

PDB id

7NWG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CAGUC*GUGCG*CGAUG

Length

15 nucleotides

Bulged bases

7NWG|1|51|C|704, 7NWG|1|51|U|1295

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWG|1|51|C|451
7NWG|1|51|A|452
7NWG|1|51|G|453
7NWG|1|51|U|454
7NWG|1|51|C|455
*
7NWG|1|51|G|701
7NWG|1|51|U|702
7NWG|1|51|G|703
7NWG|1|51|C|704
7NWG|1|51|G|705
*
7NWG|1|51|C|1292
7NWG|1|51|G|1293
7NWG|1|51|A|1294
7NWG|1|51|U|1295
7NWG|1|51|G|1296

Current chains

Chain 51

28S Ribosomal RNA

Nearby chains

Chain E3

60S ribosomal protein L6

Chain e3

eL32

Chain f3

eL33

Chain r3

eL28