J3_7NWG_034
3D structure
- PDB id
- 7NWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GGGGGG*CGCUUCUGGCGCCAAGC*GCGACC
- Length
- 29 nucleotides
- Bulged bases
- 7NWG|1|51|C|4116, 7NWG|1|51|U|4117, 7NWG|1|51|U|4118, 7NWG|1|51|G|4121, 7NWG|1|51|G|4124, 7NWG|1|51|A|4127, 7NWG|1|51|A|4157
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7NWG|1|51|G|4090
7NWG|1|51|G|4091
7NWG|1|51|G|4092
7NWG|1|51|G|4093
7NWG|1|51|G|4094
7NWG|1|51|G|4095
*
7NWG|1|51|C|4114
7NWG|1|51|G|4115
7NWG|1|51|C|4116
7NWG|1|51|U|4117
7NWG|1|51|U|4118
7NWG|1|51|C|4119
7NWG|1|51|U|4120
7NWG|1|51|G|4121
7NWG|1|51|G|4122
7NWG|1|51|C|4123
7NWG|1|51|G|4124
7NWG|1|51|C|4125
7NWG|1|51|C|4126
7NWG|1|51|A|4127
7NWG|1|51|A|4128
7NWG|1|51|G|4129
7NWG|1|51|C|4130
*
7NWG|1|51|G|4154
7NWG|1|51|C|4155
7NWG|1|51|G|4156
7NWG|1|51|A|4157
7NWG|1|51|C|4158
7NWG|1|51|C|4159
Current chains
- Chain 51
- 28S Ribosomal RNA
Nearby chains
- Chain A3
- L8
- Chain C2
- 40S ribosomal protein S3a
- Chain G3
- L7a
- Chain X3
- uL23
- Chain Z3
- 60S ribosomal protein L27
- Chain c3
- eL30
- Chain g3
- 60S ribosomal protein L34
- Chain p3
- ribosomal protein eL43
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