J3_7NWG_036

3D structure

PDB id

7NWG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CCUAUC*GUUG*CACUAAUAGG

Length

20 nucleotides

Bulged bases

7NWG|1|51|A|4464, 7NWG|1|51|U|4465

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWG|1|51|C|4461
7NWG|1|51|C|4462
7NWG|1|51|U|4463
7NWG|1|51|A|4464
7NWG|1|51|U|4465
7NWG|1|51|C|4466
*
7NWG|1|51|G|4491
7NWG|1|51|U|4492
7NWG|1|51|U|4493
7NWG|1|51|G|4494
*
7NWG|1|51|C|4506
7NWG|1|51|A|4507
7NWG|1|51|C|4508
7NWG|1|51|U|4509
7NWG|1|51|A|4510
7NWG|1|51|A|4511
7NWG|1|51|U|4512
7NWG|1|51|A|4513
7NWG|1|51|G|4514
7NWG|1|51|G|4515

Current chains

Chain 51

28S Ribosomal RNA

Nearby chains

Chain B3

uL3

Chain O3

60S RIBOSOMAL PROTEIN UL13

Chain V3

eL14