J3_7NWG_038

3D structure

PDB id

7NWG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CAUUCG*CCUGCUUCU*AAGG

Length

19 nucleotides

Bulged bases

7NWG|1|51|U|4989, 7NWG|1|51|C|4990

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWG|1|51|C|4970
7NWG|1|51|A|4971
7NWG|1|51|U|4972
7NWG|1|51|U|4973
7NWG|1|51|C|4974
7NWG|1|51|G|4975
*
7NWG|1|51|C|4983
7NWG|1|51|C|4984
7NWG|1|51|U|4985
7NWG|1|51|G|4986
7NWG|1|51|C|4987
7NWG|1|51|U|4988
7NWG|1|51|U|4989
7NWG|1|51|C|4990
7NWG|1|51|U|4991
*
7NWG|1|51|A|5060
7NWG|1|51|A|5061
7NWG|1|51|G|5062
7NWG|1|51|G|5063

Current chains

Chain 51

28S Ribosomal RNA

Nearby chains

Chain B3

uL3

Chain P3

uL22

Chain d3

eL31